Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.27■□□□□ 0.51
CHAMP1Q96JM3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHAMP1Q96JM3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.27■□□□□ 0.51
CHAMP1Q96JM3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 AL607033.1-201ENST00000623900 1599 ntBASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 RNA5SP410-201ENST00000516285 106 ntBASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 AL161645.1-201ENST00000622716 1255 ntBASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 AC079781.4-201ENST00000641908 219 ntBASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHAMP1Q96JM3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AL355306.1-201ENST00000415580 579 ntBASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 ADH5P3-201ENST00000433842 1137 ntBASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AC243562.1-201ENST00000560672 389 ntBASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AC106730.1-201ENST00000566722 1090 ntBASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AL450472.2-201ENST00000603663 1156 ntBASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 AC091812.2-201ENST00000619081 385 ntBASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.25■□□□□ 0.51
CHAMP1Q96JM3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 AZGP1P1-201ENST00000411909 902 ntBASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 KRT8P48-201ENST00000515599 1220 ntBASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 AC105233.2-201ENST00000523697 349 ntBASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 AF228730.5-201ENST00000530288 346 ntBASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 AC239800.4-201ENST00000603712 296 ntBASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.24■□□□□ 0.51
CHAMP1Q96JM3 AC055717.3-201ENST00000622967 595 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms