Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 AC148477.4-201ENST00000613430 1793 ntBASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.39■□□□□ 0.86
RAPGEF4Q8WZA2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.39■□□□□ 0.86
RAPGEF4Q8WZA2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RAPGEF4Q8WZA2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAPGEF4Q8WZA2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAPGEF4Q8WZA2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 AC004898.1-201ENST00000451057 766 ntBASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 AC069224.1-201ENST00000566372 1715 ntBASIC20.39■□□□□ 0.85
RAPGEF4Q8WZA2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 SLC25A24P2-201ENST00000415059 510 ntBASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 AL096828.3-201ENST00000615354 462 ntBASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 PRSS30P-206ENST00000641773 873 ntBASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RAPGEF4Q8WZA2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 CNN2P10-201ENST00000443067 918 ntBASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 AKR7A2P1-201ENST00000460134 915 ntBASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 MTHFR-217ENST00000641820 1569 ntBASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 LRRC59-203ENST00000576448 1531 ntBASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAPGEF4Q8WZA2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms