Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC38A9Q8NBW4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 BAATP1-201ENST00000412284 1225 ntBASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 CTBP2P5-201ENST00000454986 1264 ntBASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC38A9Q8NBW4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 AC092933.1-201ENST00000393644 945 ntBASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 BNIP3P42-201ENST00000454982 569 ntBASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 AP001063.1-201ENST00000568332 529 ntBASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 BNIP3P29-201ENST00000598302 571 ntBASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 AC107373.2-201ENST00000607735 490 ntBASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 AC011447.5-201ENST00000616168 564 ntBASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC38A9Q8NBW4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC38A9Q8NBW4 CYP2T1P-202ENST00000641596 2535 ntBASIC14.73□□□□□ -0.05
SLC38A9Q8NBW4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms