Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 MIR5572-201ENST00000583188 137 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AL023803.2-201ENST00000620080 638 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 Z98259.2-201ENST00000641583 609 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 AC099398.1-201ENST00000567919 2776 ntBASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 CEP164P1-201ENST00000455142 418 ntBASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 AC090164.2-201ENST00000611487 516 ntBASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.43□□□□□ -0.1
COL27A1Q8IZC6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC106794.1-201ENST00000506935 792 ntBASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC009779.1-201ENST00000551138 283 ntBASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC092978.1-202ENST00000637590 1327 ntBASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 RPL5P21-201ENST00000404620 815 ntBASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC253536.4-201ENST00000440539 267 ntBASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC125604.1-201ENST00000496255 707 ntBASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.42□□□□□ -0.1
COL27A1Q8IZC6 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL27A1Q8IZC6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms