Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LDLRAP1Q5SW96 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.71■□□□□ 0.1
LDLRAP1Q5SW96 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LDLRAP1Q5SW96 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
LDLRAP1Q5SW96 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LDLRAP1Q5SW96 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 TARDBPP1-201ENST00000442013 1203 ntBASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AC044860.1-202ENST00000559481 777 ntBASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SPCS2P1-201ENST00000561636 679 ntBASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AC009407.1-201ENST00000568958 598 ntBASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AC097359.3-201ENST00000603982 1210 ntBASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AL109936.8-201ENST00000641772 604 ntBASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.7■□□□□ 0.1
LDLRAP1Q5SW96 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 AP005117.1-202ENST00000581724 1908 ntBASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDLRAP1Q5SW96 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms