Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.87□□□□□ -0.19
UBE2NP61088 TERF1P3-201ENST00000505638 1227 ntBASIC13.87□□□□□ -0.19
UBE2NP61088 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.87□□□□□ -0.19
UBE2NP61088 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.87□□□□□ -0.19
UBE2NP61088 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 AC009407.1-201ENST00000568958 598 ntBASIC13.87□□□□□ -0.19
UBE2NP61088 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBE2NP61088 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.87□□□□□ -0.19
UBE2NP61088 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.87□□□□□ -0.19
UBE2NP61088 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBE2NP61088 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBE2NP61088 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2NP61088 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
UBE2NP61088 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2NP61088 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2NP61088 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.87□□□□□ -0.19
UBE2NP61088 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.86□□□□□ -0.19
UBE2NP61088 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.86□□□□□ -0.19
UBE2NP61088 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 AC112504.1-201ENST00000623415 1841 ntBASIC13.86□□□□□ -0.19
UBE2NP61088 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 MRPS18AP1-201ENST00000414458 589 ntBASIC13.86□□□□□ -0.19
UBE2NP61088 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.86□□□□□ -0.19
UBE2NP61088 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 AC114501.2-201ENST00000439631 535 ntBASIC13.86□□□□□ -0.19
UBE2NP61088 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.86□□□□□ -0.19
UBE2NP61088 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
UBE2NP61088 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.86□□□□□ -0.19
UBE2NP61088 LINC02560-201ENST00000596379 459 ntBASIC13.86□□□□□ -0.19
UBE2NP61088 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.86□□□□□ -0.19
UBE2NP61088 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 AC068418.2-201ENST00000577309 3703 ntBASIC13.86□□□□□ -0.19
UBE2NP61088 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2NP61088 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
UBE2NP61088 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2NP61088 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBE2NP61088 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2NP61088 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2NP61088 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBE2NP61088 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.85□□□□□ -0.19
UBE2NP61088 AC010491.1-201ENST00000563101 2797 ntBASIC13.85□□□□□ -0.19
UBE2NP61088 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2NP61088 AC018892.3-201ENST00000623986 2499 ntBASIC13.85□□□□□ -0.19
UBE2NP61088 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms