Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL607033.1-201ENST00000623900 1599 ntBASIC11.52□□□□□ -0.57
APOC4P55056 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC4P55056 CYP2T1P-202ENST00000641596 2535 ntBASIC11.52□□□□□ -0.57
APOC4P55056 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.52□□□□□ -0.57
APOC4P55056 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
APOC4P55056 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
APOC4P55056 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOC4P55056 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.51□□□□□ -0.57
APOC4P55056 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.51□□□□□ -0.57
APOC4P55056 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 GK-202ENST00000378941 458 ntTSL 3 BASIC11.51□□□□□ -0.57
APOC4P55056 AL133267.1-201ENST00000398220 340 ntBASIC11.51□□□□□ -0.57
APOC4P55056 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.51□□□□□ -0.57
APOC4P55056 AC074338.1-201ENST00000416825 156 ntBASIC11.51□□□□□ -0.57
APOC4P55056 SOCS2P1-201ENST00000417727 557 ntBASIC11.51□□□□□ -0.57
APOC4P55056 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 AC134915.1-201ENST00000426461 574 ntBASIC11.51□□□□□ -0.57
APOC4P55056 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.51□□□□□ -0.57
APOC4P55056 TTTY23B-201ENST00000442790 549 ntBASIC11.51□□□□□ -0.57
APOC4P55056 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.51□□□□□ -0.57
APOC4P55056 AC007389.4-201ENST00000454674 793 ntBASIC11.51□□□□□ -0.57
APOC4P55056 GPR53P-205ENST00000457298 1084 ntBASIC11.51□□□□□ -0.57
APOC4P55056 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.51□□□□□ -0.57
APOC4P55056 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.51□□□□□ -0.57
APOC4P55056 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.51□□□□□ -0.57
APOC4P55056 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.51□□□□□ -0.57
APOC4P55056 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
APOC4P55056 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 AC069224.1-201ENST00000566372 1715 ntBASIC11.51□□□□□ -0.57
APOC4P55056 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.51□□□□□ -0.57
APOC4P55056 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC11.51□□□□□ -0.57
APOC4P55056 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.51□□□□□ -0.57
APOC4P55056 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
APOC4P55056 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC4P55056 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC4P55056 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms