Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CENPFP49454 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.35■□□□□ 0.37
CENPFP49454 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CENPFP49454 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CENPFP49454 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPFP49454 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.35■□□□□ 0.37
CENPFP49454 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CENPFP49454 RN7SL596P-201ENST00000582123 288 ntBASIC17.35■□□□□ 0.37
CENPFP49454 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPFP49454 AC087045.2-201ENST00000606279 1003 ntBASIC17.35■□□□□ 0.37
CENPFP49454 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.35■□□□□ 0.37
CENPFP49454 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPFP49454 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CENPFP49454 AC013726.1-201ENST00000563747 2285 ntBASIC17.35■□□□□ 0.37
CENPFP49454 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CENPFP49454 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPFP49454 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.34■□□□□ 0.37
CENPFP49454 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.34■□□□□ 0.37
CENPFP49454 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPFP49454 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 NOC2LP1-201ENST00000450578 752 ntBASIC17.34■□□□□ 0.37
CENPFP49454 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 MIR4649-201ENST00000582839 64 ntBASIC17.34■□□□□ 0.37
CENPFP49454 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.34■□□□□ 0.37
CENPFP49454 AC068587.8-201ENST00000641239 219 ntBASIC17.34■□□□□ 0.37
CENPFP49454 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CENPFP49454 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CENPFP49454 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 AC242376.1-201ENST00000559033 726 ntBASIC17.34■□□□□ 0.37
CENPFP49454 MIR4754-201ENST00000582477 89 ntBASIC17.34■□□□□ 0.37
CENPFP49454 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPFP49454 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CENPFP49454 ZACNP1-201ENST00000612259 710 ntBASIC17.34■□□□□ 0.37
CENPFP49454 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPFP49454 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CENPFP49454 FAM8A4P-201ENST00000435433 1213 ntBASIC17.33■□□□□ 0.37
CENPFP49454 RNMTL1P1-201ENST00000454103 560 ntBASIC17.33■□□□□ 0.37
CENPFP49454 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.33■□□□□ 0.37
CENPFP49454 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
CENPFP49454 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.33■□□□□ 0.37
CENPFP49454 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.33■□□□□ 0.37
CENPFP49454 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPFP49454 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPFP49454 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPFP49454 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPFP49454 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 AC092127.1-201ENST00000567093 3455 ntBASIC17.33■□□□□ 0.36
CENPFP49454 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 TPM3P8-201ENST00000330554 643 ntBASIC17.33■□□□□ 0.36
CENPFP49454 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.33■□□□□ 0.36
CENPFP49454 AL008707.1-201ENST00000422498 534 ntBASIC17.33■□□□□ 0.36
CENPFP49454 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 NDUFS6P1-201ENST00000485187 316 ntBASIC17.33■□□□□ 0.36
CENPFP49454 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPFP49454 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.33■□□□□ 0.36
CENPFP49454 AC092171.5-201ENST00000608012 942 ntBASIC17.33■□□□□ 0.36
CENPFP49454 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPFP49454 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.33■□□□□ 0.36
CENPFP49454 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPFP49454 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPFP49454 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPFP49454 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CENPFP49454 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPFP49454 RPL18P13-201ENST00000478088 569 ntBASIC17.32■□□□□ 0.36
CENPFP49454 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.32■□□□□ 0.36
CENPFP49454 MIR4683-201ENST00000579659 81 ntBASIC17.32■□□□□ 0.36
CENPFP49454 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CENPFP49454 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms