Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.83■□□□□ 0.61
NCLP19338 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.83■□□□□ 0.61
NCLP19338 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCLP19338 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.83■□□□□ 0.61
NCLP19338 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NCLP19338 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCLP19338 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.83■□□□□ 0.61
NCLP19338 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCLP19338 AC026748.1-201ENST00000624349 3251 ntBASIC18.83■□□□□ 0.61
NCLP19338 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCLP19338 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 RNU1-129P-201ENST00000384064 167 ntBASIC18.83■□□□□ 0.6
NCLP19338 RPSAP43-201ENST00000402237 625 ntBASIC18.83■□□□□ 0.6
NCLP19338 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.83■□□□□ 0.6
NCLP19338 HCG4B-203ENST00000450128 991 ntBASIC18.83■□□□□ 0.6
NCLP19338 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NCLP19338 OR7E47P-204ENST00000575924 449 ntBASIC18.83■□□□□ 0.6
NCLP19338 U1.21-201ENST00000580816 167 ntBASIC18.83■□□□□ 0.6
NCLP19338 MIR4515-201ENST00000584082 81 ntBASIC18.83■□□□□ 0.6
NCLP19338 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.83■□□□□ 0.6
NCLP19338 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.83■□□□□ 0.6
NCLP19338 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.83■□□□□ 0.6
NCLP19338 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NCLP19338 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NCLP19338 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.83■□□□□ 0.6
NCLP19338 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.83■□□□□ 0.6
NCLP19338 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NCLP19338 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.83■□□□□ 0.6
NCLP19338 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.83■□□□□ 0.6
NCLP19338 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCLP19338 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
NCLP19338 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NCLP19338 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.82■□□□□ 0.6
NCLP19338 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NCLP19338 AC023274.1-201ENST00000418278 595 ntBASIC18.82■□□□□ 0.6
NCLP19338 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.82■□□□□ 0.6
NCLP19338 GPX1P2-201ENST00000429271 606 ntBASIC18.82■□□□□ 0.6
NCLP19338 DNAJB3-201ENST00000446806 729 ntBASIC18.82■□□□□ 0.6
NCLP19338 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.82■□□□□ 0.6
NCLP19338 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NCLP19338 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.82■□□□□ 0.6
NCLP19338 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.82■□□□□ 0.6
NCLP19338 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.82■□□□□ 0.6
NCLP19338 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.82■□□□□ 0.6
NCLP19338 AC010327.4-202ENST00000591484 748 ntBASIC18.82■□□□□ 0.6
NCLP19338 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.82■□□□□ 0.6
NCLP19338 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.82■□□□□ 0.6
NCLP19338 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
NCLP19338 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC18.82■□□□□ 0.6
NCLP19338 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCLP19338 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.81■□□□□ 0.6
NCLP19338 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
NCLP19338 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NCLP19338 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NCLP19338 HMGA1P7-201ENST00000406908 502 ntBASIC18.81■□□□□ 0.6
NCLP19338 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.81■□□□□ 0.6
NCLP19338 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.81■□□□□ 0.6
NCLP19338 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.81■□□□□ 0.6
NCLP19338 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms