Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 RPL17P45-201ENST00000586289 509 ntBASIC23.02■■□□□ 1.28
RAPGEF3O95398 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF3O95398 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF3O95398 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAPGEF3O95398 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 AC011477.6-201ENST00000604980 1927 ntBASIC23.02■■□□□ 1.28
RAPGEF3O95398 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RAPGEF3O95398 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RAPGEF3O95398 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.27
RAPGEF3O95398 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 AP000356.3-201ENST00000382243 753 ntBASIC23.01■■□□□ 1.27
RAPGEF3O95398 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 AC092171.3-201ENST00000610122 2651 ntBASIC23.01■■□□□ 1.27
RAPGEF3O95398 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RAPGEF3O95398 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAPGEF3O95398 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF3O95398 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF3O95398 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
RAPGEF3O95398 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF3O95398 AC020916.1-201ENST00000587762 1774 ntBASIC23■■□□□ 1.27
RAPGEF3O95398 AC055811.4-201ENST00000624039 1754 ntBASIC23■■□□□ 1.27
RAPGEF3O95398 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RAPGEF3O95398 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF3O95398 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 AL157792.1-201ENST00000488281 530 ntBASIC23■■□□□ 1.27
RAPGEF3O95398 RN7SL67P-201ENST00000492147 296 ntBASIC23■■□□□ 1.27
RAPGEF3O95398 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC23■■□□□ 1.27
RAPGEF3O95398 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RAPGEF3O95398 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 AP001094.4-201ENST00000579008 2176 ntBASIC22.99■■□□□ 1.27
RAPGEF3O95398 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 AC079112.1-201ENST00000454972 939 ntBASIC22.99■■□□□ 1.27
RAPGEF3O95398 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 AC026803.1-201ENST00000569130 274 ntBASIC22.99■■□□□ 1.27
RAPGEF3O95398 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAPGEF3O95398 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.99■■□□□ 1.27
RAPGEF3O95398 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAPGEF3O95398 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.98■■□□□ 1.27
RAPGEF3O95398 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms