Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.58■□□□□ 0.08
TLR4O00206 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.58■□□□□ 0.08
TLR4O00206 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.58■□□□□ 0.08
TLR4O00206 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.08
TLR4O00206 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.58■□□□□ 0.08
TLR4O00206 AL022328.1-201ENST00000610050 478 ntBASIC15.58■□□□□ 0.08
TLR4O00206 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TLR4O00206 AL033527.4-201ENST00000641026 673 ntBASIC15.58■□□□□ 0.08
TLR4O00206 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TLR4O00206 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TLR4O00206 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.58■□□□□ 0.08
TLR4O00206 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.58■□□□□ 0.08
TLR4O00206 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TLR4O00206 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TLR4O00206 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TLR4O00206 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.57■□□□□ 0.08
TLR4O00206 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 INTS4P2-202ENST00000614726 2019 ntBASIC15.57■□□□□ 0.08
TLR4O00206 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 SOCS2P1-201ENST00000417727 557 ntBASIC15.57■□□□□ 0.08
TLR4O00206 AC136604.1-201ENST00000418535 575 ntBASIC15.57■□□□□ 0.08
TLR4O00206 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.57■□□□□ 0.08
TLR4O00206 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.57■□□□□ 0.08
TLR4O00206 AC092658.1-201ENST00000505836 891 ntBASIC15.57■□□□□ 0.08
TLR4O00206 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.57■□□□□ 0.08
TLR4O00206 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.57■□□□□ 0.08
TLR4O00206 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.57■□□□□ 0.08
TLR4O00206 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TLR4O00206 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.57■□□□□ 0.08
TLR4O00206 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TLR4O00206 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.56■□□□□ 0.08
TLR4O00206 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TLR4O00206 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms