Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA2E9PIF3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 AL512384.1-201ENST00000406683 331 ntBASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 MEIS3P1-201ENST00000495167 958 ntBASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 AC132938.2-201ENST00000579188 680 ntBASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 AL591163.1-201ENST00000641757 987 ntBASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA2E9PIF3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 KRT8P37-201ENST00000451609 1420 ntBASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AZGP1P1-201ENST00000411909 902 ntBASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AC092337.1-201ENST00000568699 1129 ntBASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA2E9PIF3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms