Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 AC092337.1-201ENST00000568699 1129 ntBASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 AC025048.6-201ENST00000634326 1161 ntBASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 HYMAI-201ENST00000635591 3347 ntBASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 CICP13-201ENST00000422015 2789 ntBASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.59■□□□□ 0.41
COL4A3BPQ9Y5P4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 AC022532.1-201ENST00000624563 1728 ntBASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 AC092850.2-201ENST00000623821 2697 ntBASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.58■□□□□ 0.41
COL4A3BPQ9Y5P4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 AC005225.4-201ENST00000557330 545 ntBASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 AC012645.4-201ENST00000610691 1061 ntBASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.58■□□□□ 0.4
COL4A3BPQ9Y5P4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AL391825.1-201ENST00000457671 1364 ntBASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 TPRX2P-201ENST00000535362 881 ntBASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 TIMM17BP1-201ENST00000545713 516 ntBASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 TP53TG3HP-202ENST00000569755 579 ntBASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AC140912.1-201ENST00000577171 1054 ntBASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.57■□□□□ 0.4
COL4A3BPQ9Y5P4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms