Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SCN11AQ9UI33 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.77■□□□□ 0.75
SCN11AQ9UI33 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN11AQ9UI33 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCN11AQ9UI33 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN11AQ9UI33 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 AC104982.3-201ENST00000581995 514 ntBASIC19.76■□□□□ 0.75
SCN11AQ9UI33 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.76■□□□□ 0.75
SCN11AQ9UI33 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCN11AQ9UI33 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 NKAIN1P1-201ENST00000435754 582 ntBASIC19.75■□□□□ 0.75
SCN11AQ9UI33 CHMP1AP1-201ENST00000445563 662 ntBASIC19.75■□□□□ 0.75
SCN11AQ9UI33 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 AKR7A2P1-201ENST00000460134 915 ntBASIC19.75■□□□□ 0.75
SCN11AQ9UI33 MESTP3-201ENST00000503460 968 ntBASIC19.75■□□□□ 0.75
SCN11AQ9UI33 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 AL358472.3-201ENST00000608147 415 ntBASIC19.75■□□□□ 0.75
SCN11AQ9UI33 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.75■□□□□ 0.75
SCN11AQ9UI33 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN11AQ9UI33 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN11AQ9UI33 AL118508.1-201ENST00000613502 2345 ntBASIC19.74■□□□□ 0.75
SCN11AQ9UI33 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms