Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 AL135744.1-201ENST00000565098 629 ntBASIC18.11■□□□□ 0.49
USP25Q9UHP3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.11■□□□□ 0.49
USP25Q9UHP3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 AC027307.2-201ENST00000591252 911 ntBASIC18.11■□□□□ 0.49
USP25Q9UHP3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 AC091812.2-201ENST00000619081 385 ntBASIC18.11■□□□□ 0.49
USP25Q9UHP3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 AL390755.1-201ENST00000623716 2027 ntBASIC18.11■□□□□ 0.49
USP25Q9UHP3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 AL161772.1-201ENST00000610494 4412 ntBASIC18.1■□□□□ 0.49
USP25Q9UHP3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 AL691432.1-201ENST00000596308 1422 ntBASIC18.1■□□□□ 0.49
USP25Q9UHP3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP25Q9UHP3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP25Q9UHP3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 AC117489.1-201ENST00000625169 3217 ntBASIC18.09■□□□□ 0.49
USP25Q9UHP3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 FAM220BP-201ENST00000377689 816 ntBASIC18.09■□□□□ 0.49
USP25Q9UHP3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 AC142381.1-201ENST00000426099 345 ntBASIC18.09■□□□□ 0.49
USP25Q9UHP3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 AC092902.6-201ENST00000641783 218 ntBASIC18.09■□□□□ 0.49
USP25Q9UHP3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 AC134407.2-201ENST00000625089 1978 ntBASIC18.09■□□□□ 0.49
USP25Q9UHP3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP25Q9UHP3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.09■□□□□ 0.49
USP25Q9UHP3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms