Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
YIPF4Q9BSR8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.89□□□□□ -0.03
YIPF4Q9BSR8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 SPDYE14P-201ENST00000442619 822 ntBASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 AC105021.1-202ENST00000570572 669 ntBASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 AC087481.3-201ENST00000602886 1894 ntBASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
YIPF4Q9BSR8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AC023141.5-201ENST00000458585 616 ntBASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 MIR4453-201ENST00000584019 89 ntBASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AL450472.2-201ENST00000603663 1156 ntBASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.87□□□□□ -0.03
YIPF4Q9BSR8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 AC105250.1-201ENST00000509378 2057 ntBASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
YIPF4Q9BSR8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms