Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 AC073352.2-201ENST00000609385 439 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN18Q99952 AL023803.2-201ENST00000620080 638 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN18Q99952 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
PTPN18Q99952 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN18Q99952 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPN18Q99952 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PTPN18Q99952 AC006449.6-201ENST00000612330 2296 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PTPN18Q99952 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN18Q99952 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPN18Q99952 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPN18Q99952 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.73■□□□□ 0.43
PTPN18Q99952 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPN18Q99952 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN18Q99952 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPN18Q99952 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN18Q99952 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN18Q99952 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN18Q99952 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPN18Q99952 AC013355.1-201ENST00000562625 723 ntBASIC17.73■□□□□ 0.43
PTPN18Q99952 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.73■□□□□ 0.43
PTPN18Q99952 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN18Q99952 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
PTPN18Q99952 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN18Q99952 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN18Q99952 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPN18Q99952 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTPN18Q99952 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.72■□□□□ 0.43
PTPN18Q99952 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPN18Q99952 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 AC004923.1-202ENST00000642106 209 ntBASIC17.72■□□□□ 0.43
PTPN18Q99952 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPN18Q99952 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN18Q99952 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PTPN18Q99952 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PTPN18Q99952 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.72■□□□□ 0.43
PTPN18Q99952 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms