Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 DRD5P1-201ENST00000456605 1438 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 CU639417.3-201ENST00000624240 1404 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AC092850.2-201ENST00000623821 2697 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ECHDC3Q96DC8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AC020658.6-201ENST00000623564 1870 ntBASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 INTS4P2-202ENST00000614726 2019 ntBASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 VDAC1P7-201ENST00000462417 847 ntBASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 CR383656.12-201ENST00000549567 513 ntBASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AC025181.2-201ENST00000606994 802 ntBASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
ECHDC3Q96DC8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
ECHDC3Q96DC8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 AL359711.2-201ENST00000563105 872 ntBASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 AC120045.2-201ENST00000567334 178 ntBASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.64■□□□□ 0.09
ECHDC3Q96DC8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms