Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFX6Q8HWS3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 MTND6P24-201ENST00000440466 518 ntBASIC16.42■□□□□ 0.22
RFX6Q8HWS3 AC023141.5-201ENST00000458585 616 ntBASIC16.42■□□□□ 0.22
RFX6Q8HWS3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 AC097359.3-201ENST00000603982 1210 ntBASIC16.42■□□□□ 0.22
RFX6Q8HWS3 MIR6080-201ENST00000617359 66 ntBASIC16.42■□□□□ 0.22
RFX6Q8HWS3 AC009093.7-201ENST00000623853 1223 ntBASIC16.42■□□□□ 0.22
RFX6Q8HWS3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFX6Q8HWS3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 AC006486.2-201ENST00000624246 2199 ntBASIC16.41■□□□□ 0.22
RFX6Q8HWS3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 AL607033.1-201ENST00000623900 1599 ntBASIC16.41■□□□□ 0.22
RFX6Q8HWS3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFX6Q8HWS3 C18orf15-201ENST00000623680 2534 ntBASIC16.41■□□□□ 0.22
RFX6Q8HWS3 AC011270.2-201ENST00000624293 2550 ntBASIC16.4■□□□□ 0.22
RFX6Q8HWS3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 MIR4453-201ENST00000584019 89 ntBASIC16.4■□□□□ 0.22
RFX6Q8HWS3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 RN7SL828P-201ENST00000607615 303 ntBASIC16.4■□□□□ 0.22
RFX6Q8HWS3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 AC112693.3-201ENST00000624819 1983 ntBASIC16.4■□□□□ 0.22
RFX6Q8HWS3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFX6Q8HWS3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms