Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE3BQ7Z3V4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 AP001889.1-201ENST00000525414 633 ntBASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE3BQ7Z3V4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 AC127383.1-201ENST00000444697 1800 ntBASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 KRT43P-201ENST00000434019 910 ntBASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 AP001063.1-201ENST00000568332 529 ntBASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 AC093813.1-201ENST00000605066 256 ntBASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.49■□□□□ 0.71
UBE3BQ7Z3V4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AC009090.5-201ENST00000624886 2285 ntBASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 PDIA3P1-201ENST00000471856 1510 ntBASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AC005229.1-201ENST00000392885 409 ntBASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 BAATP1-201ENST00000412284 1225 ntBASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AP001582.1-201ENST00000525856 295 ntBASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AC009486.1-201ENST00000569860 813 ntBASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AC025181.2-201ENST00000606994 802 ntBASIC19.48■□□□□ 0.71
UBE3BQ7Z3V4 AC022188.1-201ENST00000620960 1664 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms