Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC149Q6ZUS6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 AC244669.2-201ENST00000612320 853 ntBASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC149Q6ZUS6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 MSTO2P-201ENST00000314835 1709 ntBASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AC026954.1-201ENST00000429771 1293 ntBASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AC022137.2-201ENST00000503482 481 ntBASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 DUX4L45-201ENST00000566406 1057 ntBASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AC107373.2-201ENST00000607735 490 ntBASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AC008687.7-202ENST00000637404 953 ntBASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 AC018892.3-201ENST00000623986 2499 ntBASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC149Q6ZUS6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.46■□□□□ 0.22
CCDC149Q6ZUS6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC149Q6ZUS6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CCDC149Q6ZUS6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC149Q6ZUS6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC149Q6ZUS6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms