Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDS5AQ29RF7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.67■□□□□ 0.58
PDS5AQ29RF7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 HLA-V-201ENST00000429037 534 ntBASIC18.67■□□□□ 0.58
PDS5AQ29RF7 C2orf27AP3-201ENST00000434123 579 ntBASIC18.67■□□□□ 0.58
PDS5AQ29RF7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 AL354718.3-201ENST00000616414 581 ntBASIC18.67■□□□□ 0.58
PDS5AQ29RF7 CR382287.1-201ENST00000623954 586 ntBASIC18.67■□□□□ 0.58
PDS5AQ29RF7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
PDS5AQ29RF7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC007787.1-201ENST00000588095 1583 ntBASIC18.66■□□□□ 0.58
PDS5AQ29RF7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AL365203.3-201ENST00000609742 2057 ntBASIC18.66■□□□□ 0.58
PDS5AQ29RF7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AL139094.1-201ENST00000405549 1188 ntBASIC18.66■□□□□ 0.58
PDS5AQ29RF7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC132938.4-201ENST00000623835 848 ntBASIC18.66■□□□□ 0.58
PDS5AQ29RF7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 AC008687.7-202ENST00000637404 953 ntBASIC18.66■□□□□ 0.58
PDS5AQ29RF7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDS5AQ29RF7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 AC006001.1-201ENST00000325130 474 ntBASIC18.65■□□□□ 0.58
PDS5AQ29RF7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.65■□□□□ 0.58
PDS5AQ29RF7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms