Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
NKX6-1P78426 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NKX6-1P78426 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NKX6-1P78426 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 AC105917.1-201ENST00000506637 2539 ntBASIC13.96□□□□□ -0.17
NKX6-1P78426 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
NKX6-1P78426 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-1P78426 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 REXO1L8P-201ENST00000604378 1897 ntBASIC13.96□□□□□ -0.17
NKX6-1P78426 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NKX6-1P78426 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NKX6-1P78426 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NKX6-1P78426 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX6-1P78426 MIR1909-201ENST00000411312 80 ntBASIC13.96□□□□□ -0.17
NKX6-1P78426 RPL37AP1-201ENST00000412502 279 ntBASIC13.96□□□□□ -0.17
NKX6-1P78426 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX6-1P78426 ACA64.2-201ENST00000459014 129 ntBASIC13.96□□□□□ -0.17
NKX6-1P78426 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX6-1P78426 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NKX6-1P78426 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX6-1P78426 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.96□□□□□ -0.17
NKX6-1P78426 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.96□□□□□ -0.17
NKX6-1P78426 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX6-1P78426 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NKX6-1P78426 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NKX6-1P78426 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 AL133215.2-201ENST00000609242 977 ntBASIC13.96□□□□□ -0.17
NKX6-1P78426 AL844908.2-201ENST00000609461 460 ntBASIC13.96□□□□□ -0.17
NKX6-1P78426 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
NKX6-1P78426 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX6-1P78426 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-1P78426 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-1P78426 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NKX6-1P78426 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NKX6-1P78426 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-1P78426 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.96□□□□□ -0.18
NKX6-1P78426 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NKX6-1P78426 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
NKX6-1P78426 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.96□□□□□ -0.18
NKX6-1P78426 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NKX6-1P78426 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
NKX6-1P78426 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-1P78426 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-1P78426 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-1P78426 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-1P78426 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-1P78426 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX6-1P78426 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-1P78426 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NKX6-1P78426 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX6-1P78426 AC099063.4-201ENST00000641099 1602 ntBASIC13.95□□□□□ -0.18
NKX6-1P78426 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
NKX6-1P78426 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-1P78426 MIR658-201ENST00000385210 100 ntBASIC13.95□□□□□ -0.18
NKX6-1P78426 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX6-1P78426 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX6-1P78426 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-1P78426 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX6-1P78426 GNAQP1-201ENST00000444815 1067 ntBASIC13.95□□□□□ -0.18
NKX6-1P78426 AC245100.5-201ENST00000452108 331 ntBASIC13.95□□□□□ -0.18
NKX6-1P78426 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX6-1P78426 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NKX6-1P78426 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NKX6-1P78426 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms