Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 LINC01101-201ENST00000622953 1884 ntBASIC13.89□□□□□ -0.19
SEC61A1P61619 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 AC136621.1-201ENST00000624017 2304 ntBASIC13.89□□□□□ -0.19
SEC61A1P61619 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SEC61A1P61619 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 AL139400.1-201ENST00000366220 510 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC092474.2-201ENST00000424288 719 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC61A1P61619 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC079140.1-201ENST00000508039 487 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC61A1P61619 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC109635.5-201ENST00000533593 962 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC243562.1-201ENST00000560672 389 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 AC093520.2-201ENST00000561830 333 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC027796.2-201ENST00000575326 344 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AL161645.1-201ENST00000622716 1255 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 MYO15B-237ENST00000642007 4893 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SEC61A1P61619 C8orf49-201ENST00000525043 1968 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 PCGF3-213ENST00000620529 1899 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC007191.1-201ENST00000623179 2995 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 AC016027.1-202ENST00000607927 1699 ntBASIC13.88□□□□□ -0.19
SEC61A1P61619 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC61A1P61619 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC61A1P61619 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SEC61A1P61619 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CICP14-201ENST00000629111 2732 ntBASIC13.87□□□□□ -0.19
SEC61A1P61619 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SEC61A1P61619 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC61A1P61619 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms