Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ATP1B3P54709 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 TMBIM7P-203ENST00000641617 1718 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ATP1B3P54709 AL355306.1-201ENST00000415580 579 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.74□□□□□ -0.21
ATP1B3P54709 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.74□□□□□ -0.21
ATP1B3P54709 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
ATP1B3P54709 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.74□□□□□ -0.21
ATP1B3P54709 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.74□□□□□ -0.21
ATP1B3P54709 RNA5SP410-201ENST00000516285 106 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 AL109954.1-202ENST00000564051 2148 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.74□□□□□ -0.21
ATP1B3P54709 AC061975.2-201ENST00000581722 295 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.74□□□□□ -0.21
ATP1B3P54709 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 AC091812.2-201ENST00000619081 385 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.74□□□□□ -0.21
ATP1B3P54709 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 AC139749.1-202ENST00000617529 3139 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
ATP1B3P54709 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 AC087481.3-201ENST00000602886 1894 ntBASIC13.74□□□□□ -0.21
ATP1B3P54709 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ATP1B3P54709 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
ATP1B3P54709 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 AL691432.1-201ENST00000596308 1422 ntBASIC13.73□□□□□ -0.21
ATP1B3P54709 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
ATP1B3P54709 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.73□□□□□ -0.21
ATP1B3P54709 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.73□□□□□ -0.21
ATP1B3P54709 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.73□□□□□ -0.21
ATP1B3P54709 FAM58CP-201ENST00000435741 640 ntBASIC13.73□□□□□ -0.21
ATP1B3P54709 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 SPDYE11-202ENST00000450699 704 ntBASIC13.73□□□□□ -0.21
ATP1B3P54709 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ATP1B3P54709 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.73□□□□□ -0.21
ATP1B3P54709 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.73□□□□□ -0.21
ATP1B3P54709 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.73□□□□□ -0.21
ATP1B3P54709 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.73□□□□□ -0.21
ATP1B3P54709 SLC25A1P1-201ENST00000528351 927 ntBASIC13.73□□□□□ -0.21
ATP1B3P54709 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.73□□□□□ -0.21
ATP1B3P54709 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 SPDYE9P-201ENST00000570642 692 ntBASIC13.73□□□□□ -0.21
ATP1B3P54709 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 SPDYE10P-202ENST00000612005 668 ntBASIC13.73□□□□□ -0.21
ATP1B3P54709 SPDYE8P-202ENST00000612377 668 ntBASIC13.73□□□□□ -0.21
ATP1B3P54709 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.73□□□□□ -0.21
ATP1B3P54709 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.73□□□□□ -0.21
ATP1B3P54709 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ATP1B3P54709 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATP1B3P54709 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATP1B3P54709 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATP1B3P54709 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATP1B3P54709 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms