Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC4P35249 RPS2P36-201ENST00000456516 831 ntBASIC19.55■□□□□ 0.72
RFC4P35249 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.55■□□□□ 0.72
RFC4P35249 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC4P35249 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC4P35249 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.55■□□□□ 0.72
RFC4P35249 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.55■□□□□ 0.72
RFC4P35249 MIR4313-201ENST00000580760 101 ntBASIC19.55■□□□□ 0.72
RFC4P35249 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.55■□□□□ 0.72
RFC4P35249 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC4P35249 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC4P35249 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC4P35249 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
RFC4P35249 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RFC4P35249 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RFC4P35249 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC4P35249 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 MIR648-201ENST00000385046 94 ntBASIC19.54■□□□□ 0.72
RFC4P35249 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.54■□□□□ 0.72
RFC4P35249 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC4P35249 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC4P35249 SPTLC1P5-201ENST00000450718 252 ntBASIC19.54■□□□□ 0.72
RFC4P35249 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.54■□□□□ 0.72
RFC4P35249 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.54■□□□□ 0.72
RFC4P35249 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC4P35249 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC4P35249 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RFC4P35249 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC4P35249 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 U62317.3-201ENST00000608319 855 ntBASIC19.54■□□□□ 0.72
RFC4P35249 AC128714.1-201ENST00000637035 887 ntBASIC19.54■□□□□ 0.72
RFC4P35249 PRSS30P-206ENST00000641773 873 ntBASIC19.54■□□□□ 0.72
RFC4P35249 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC4P35249 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
RFC4P35249 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RFC4P35249 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC4P35249 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC4P35249 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC4P35249 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC4P35249 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC4P35249 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.53■□□□□ 0.72
RFC4P35249 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC4P35249 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.53■□□□□ 0.72
RFC4P35249 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC4P35249 PPY2P-201ENST00000582808 702 ntBASIC19.53■□□□□ 0.72
RFC4P35249 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC4P35249 SPCS2P2-201ENST00000603270 608 ntBASIC19.53■□□□□ 0.72
RFC4P35249 AC025181.2-201ENST00000606994 802 ntBASIC19.53■□□□□ 0.72
RFC4P35249 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC4P35249 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC4P35249 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RFC4P35249 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RFC4P35249 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC4P35249 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC4P35249 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.52■□□□□ 0.72
RFC4P35249 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC4P35249 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC4P35249 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RFC4P35249 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.52■□□□□ 0.72
RFC4P35249 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.52■□□□□ 0.72
RFC4P35249 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms