Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 AC061975.2-201ENST00000581722 295 ntBASIC14.22□□□□□ -0.13
HLA-DQA2P01906 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQA2P01906 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AC018892.3-201ENST00000623986 2499 ntBASIC14.21□□□□□ -0.13
HLA-DQA2P01906 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AC023824.1-201ENST00000562945 2975 ntBASIC14.21□□□□□ -0.13
HLA-DQA2P01906 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AC026396.1-201ENST00000419388 421 ntBASIC14.21□□□□□ -0.13
HLA-DQA2P01906 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 TIMM8BP1-201ENST00000452384 211 ntBASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AC040169.1-201ENST00000565382 521 ntBASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 AL691432.1-201ENST00000596308 1422 ntBASIC14.21□□□□□ -0.13
HLA-DQA2P01906 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQA2P01906 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DQA2P01906 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQA2P01906 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms