Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC21.28■■□□□ 1
CHD2O14647 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD2O14647 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD2O14647 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.28■■□□□ 1
CHD2O14647 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD2O14647 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 NAGK-204ENST00000443872 878 ntTSL 3 BASIC21.27■■□□□ 1
CHD2O14647 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.27■■□□□ 1
CHD2O14647 TMCO5B-205ENST00000530020 894 ntBASIC21.27■■□□□ 1
CHD2O14647 RBM8B-201ENST00000555532 525 ntBASIC21.27■■□□□ 1
CHD2O14647 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.27■■□□□ 1
CHD2O14647 NAP1L6-202ENST00000641404 1222 ntBASIC21.27■■□□□ 1
CHD2O14647 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
CHD2O14647 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.27■■□□□ 1
CHD2O14647 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CHD2O14647 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
CHD2O14647 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CHD2O14647 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD2O14647 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CHD2O14647 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC21.27■□□□□ 0.99
CHD2O14647 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHD2O14647 AC026803.1-201ENST00000569130 274 ntBASIC21.27■□□□□ 0.99
CHD2O14647 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC21.27■□□□□ 0.99
CHD2O14647 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHD2O14647 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD2O14647 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD2O14647 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD2O14647 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD2O14647 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 MBLAC2-202ENST00000514906 1936 ntBASIC21.26■□□□□ 0.99
CHD2O14647 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHD2O14647 AC244394.1-201ENST00000435000 1665 ntBASIC21.26■□□□□ 0.99
CHD2O14647 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD2O14647 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC21.26■□□□□ 0.99
CHD2O14647 RN7SL818P-201ENST00000485099 259 ntBASIC21.26■□□□□ 0.99
CHD2O14647 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC21.26■□□□□ 0.99
CHD2O14647 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD2O14647 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
CHD2O14647 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC21.26■□□□□ 0.99
CHD2O14647 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC21.26■□□□□ 0.99
CHD2O14647 RN7SL725P-201ENST00000606439 259 ntBASIC21.26■□□□□ 0.99
CHD2O14647 MIR6842-201ENST00000612539 65 ntBASIC21.26■□□□□ 0.99
CHD2O14647 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHD2O14647 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD2O14647 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CHD2O14647 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD2O14647 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CHD2O14647 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD2O14647 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD2O14647 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CHD2O14647 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 RPS9P1-201ENST00000419943 583 ntBASIC21.25■□□□□ 0.99
CHD2O14647 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD2O14647 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 PAM16-211ENST00000575848 518 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD2O14647 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHD2O14647 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD2O14647 AC005962.1-201ENST00000584100 773 ntBASIC21.25■□□□□ 0.99
CHD2O14647 AC007718.1-201ENST00000621078 280 ntBASIC21.25■□□□□ 0.99
CHD2O14647 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD2O14647 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHD2O14647 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD2O14647 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CHD2O14647 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD2O14647 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD2O14647 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD2O14647 AC141586.1-203ENST00000567242 366 ntBASIC21.25■□□□□ 0.99
CHD2O14647 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD2O14647 AL157813.1-201ENST00000612996 587 ntBASIC21.25■□□□□ 0.99
CHD2O14647 INE2-201ENST00000630399 1874 ntBASIC21.25■□□□□ 0.99
CHD2O14647 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
CHD2O14647 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms