Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXC2Q99958 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXC2Q99958 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXC2Q99958 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.76■□□□□ 0.75
FOXC2Q99958 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXC2Q99958 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 SYT6-210ENST00000641643 1587 ntBASIC19.75■□□□□ 0.75
FOXC2Q99958 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.75■□□□□ 0.75
FOXC2Q99958 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 IRS3P-201ENST00000223076 1006 ntBASIC19.75■□□□□ 0.75
FOXC2Q99958 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FOXC2Q99958 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXC2Q99958 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXC2Q99958 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FOXC2Q99958 AC142472.1-201ENST00000612013 1741 ntBASIC19.74■□□□□ 0.75
FOXC2Q99958 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXC2Q99958 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXC2Q99958 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXC2Q99958 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXC2Q99958 AC027682.1-201ENST00000562846 899 ntBASIC19.74■□□□□ 0.75
FOXC2Q99958 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXC2Q99958 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FOXC2Q99958 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXC2Q99958 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXC2Q99958 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXC2Q99958 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXC2Q99958 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXC2Q99958 MIR4767-201ENST00000582827 78 ntBASIC19.73■□□□□ 0.75
FOXC2Q99958 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXC2Q99958 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
FOXC2Q99958 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
FOXC2Q99958 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXC2Q99958 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
FOXC2Q99958 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
FOXC2Q99958 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXC2Q99958 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXC2Q99958 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.72■□□□□ 0.75
FOXC2Q99958 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXC2Q99958 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXC2Q99958 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.72■□□□□ 0.75
FOXC2Q99958 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXC2Q99958 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXC2Q99958 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXC2Q99958 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXC2Q99958 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXC2Q99958 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXC2Q99958 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXC2Q99958 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXC2Q99958 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXC2Q99958 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXC2Q99958 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXC2Q99958 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXC2Q99958 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXC2Q99958 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXC2Q99958 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXC2Q99958 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXC2Q99958 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXC2Q99958 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FOXC2Q99958 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXC2Q99958 AC139426.1-201ENST00000568218 2529 ntBASIC19.68■□□□□ 0.74
FOXC2Q99958 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXC2Q99958 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXC2Q99958 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXC2Q99958 AL137784.2-201ENST00000607332 1000 ntBASIC19.67■□□□□ 0.74
FOXC2Q99958 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXC2Q99958 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXC2Q99958 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXC2Q99958 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXC2Q99958 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FOXC2Q99958 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXC2Q99958 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXC2Q99958 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXC2Q99958 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXC2Q99958 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXC2Q99958 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FOXC2Q99958 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 AC034268.1-201ENST00000441047 882 ntBASIC19.65■□□□□ 0.74
FOXC2Q99958 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXC2Q99958 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXC2Q99958 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.65■□□□□ 0.74
FOXC2Q99958 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXC2Q99958 FOXO3B-201ENST00000395675 1928 ntBASIC19.64■□□□□ 0.74
FOXC2Q99958 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXC2Q99958 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXC2Q99958 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXC2Q99958 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXC2Q99958 AL138724.1-201ENST00000606771 1088 ntBASIC19.64■□□□□ 0.73
FOXC2Q99958 AC011298.3-201ENST00000615796 283 ntBASIC19.64■□□□□ 0.73
FOXC2Q99958 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms