Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm11Q8BUV6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm11Q8BUV6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm11Q8BUV6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm11Q8BUV6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm11Q8BUV6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm11Q8BUV6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm11Q8BUV6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm11Q8BUV6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm11Q8BUV6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm11Q8BUV6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm11Q8BUV6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm11Q8BUV6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm11Q8BUV6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm11Q8BUV6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm11Q8BUV6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.78■□□□□ 0.44
Lsm11Q8BUV6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm11Q8BUV6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lsm11Q8BUV6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Lsm11Q8BUV6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm11Q8BUV6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm11Q8BUV6 Gm6311-201ENSMUST00000073790 878 ntBASIC17.77■□□□□ 0.44
Lsm11Q8BUV6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm11Q8BUV6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm11Q8BUV6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Lsm11Q8BUV6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm11Q8BUV6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm11Q8BUV6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm11Q8BUV6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm11Q8BUV6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm11Q8BUV6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm11Q8BUV6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm11Q8BUV6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm11Q8BUV6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.75■□□□□ 0.43
Lsm11Q8BUV6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lsm11Q8BUV6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm11Q8BUV6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm11Q8BUV6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm11Q8BUV6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.74■□□□□ 0.43
Lsm11Q8BUV6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm11Q8BUV6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms