Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 QDR1YIL120W 1692 nt5.48□□□□□ -1.53
YNL040WP53960 ICE2YIL090W 1476 nt5.48□□□□□ -1.53
YNL040WP53960 DFG5YMR238W 1377 nt5.48□□□□□ -1.53
YNL040WP53960 GON7YJL184W 372 nt5.48□□□□□ -1.53
YNL040WP53960 YKL151CYKL151C 1014 nt5.48□□□□□ -1.53
YNL040WP53960 SYG1YIL047C 2709 nt5.48□□□□□ -1.53
YNL040WP53960 FRE3YOR381W 2136 nt5.48□□□□□ -1.53
YNL040WP53960 ELP3YPL086C 1674 nt5.47□□□□□ -1.53
YNL040WP53960 YER187WYER187W 426 nt5.47□□□□□ -1.53
YNL040WP53960 RPT6YGL048C 1218 nt5.47□□□□□ -1.53
YNL040WP53960 LEM3YNL323W 1245 nt5.47□□□□□ -1.53
YNL040WP53960 TFC6YDR362C 2019 nt5.47□□□□□ -1.53
YNL040WP53960 SLT2YHR030C 1455 nt5.46□□□□□ -1.53
YNL040WP53960 YDL121CYDL121C 450 nt5.46□□□□□ -1.54
YNL040WP53960 SLO1YER180C-A 258 nt5.46□□□□□ -1.54
YNL040WP53960 GUF1YLR289W 1938 nt5.46□□□□□ -1.54
YNL040WP53960 HES1YOR237W 1305 nt5.46□□□□□ -1.54
YNL040WP53960 EMW1YNL313C 2715 nt5.46□□□□□ -1.54
YNL040WP53960 DBF4YDR052C 2115 nt5.45□□□□□ -1.54
YNL040WP53960 MMP1YLL061W 1752 nt5.45□□□□□ -1.54
YNL040WP53960 TRP1YDR007W 675 nt5.45□□□□□ -1.54
YNL040WP53960 MLC1YGL106W 450 nt5.45□□□□□ -1.54
YNL040WP53960 STE50YCL032W 1041 nt5.45□□□□□ -1.54
YNL040WP53960 CTS1YLR286C 1689 nt5.44□□□□□ -1.54
YNL040WP53960 KIP2YPL155C 2121 nt5.44□□□□□ -1.54
YNL040WP53960 KNH1YDL049C 807 nt5.44□□□□□ -1.54
YNL040WP53960 PRO3YER023W 861 nt5.44□□□□□ -1.54
YNL040WP53960 DAL3YIR032C 588 nt5.44□□□□□ -1.54
YNL040WP53960 YJL068CYJL068C 900 nt5.44□□□□□ -1.54
YNL040WP53960 YJL107CYJL107C 1164 nt5.44□□□□□ -1.54
YNL040WP53960 YOR318CYOR318C 306 nt5.44□□□□□ -1.54
YNL040WP53960 CAR1YPL111W 1002 nt5.44□□□□□ -1.54
YNL040WP53960 TEL2YGR099W 2067 nt5.44□□□□□ -1.54
YNL040WP53960 ATG20YDL113C 1923 nt5.43□□□□□ -1.54
YNL040WP53960 FET3YMR058W 1911 nt5.43□□□□□ -1.54
YNL040WP53960 YMR027WYMR027W 1413 nt5.43□□□□□ -1.54
YNL040WP53960 TEA1YOR337W 2280 nt5.43□□□□□ -1.54
YNL040WP53960 PAP2YOL115W 1755 nt5.43□□□□□ -1.54
YNL040WP53960 CDC11YJR076C 1248 nt5.43□□□□□ -1.54
YNL040WP53960 RER2YBR002C 861 nt5.43□□□□□ -1.54
YNL040WP53960 SED4YCR067C 3198 nt5.42□□□□□ -1.54
YNL040WP53960 RML2YEL050C 1182 nt5.42□□□□□ -1.54
YNL040WP53960 YPT32YGL210W 669 nt5.42□□□□□ -1.54
YNL040WP53960 YGR182CYGR182C 354 nt5.42□□□□□ -1.54
YNL040WP53960 CBF1YJR060W 1056 nt5.42□□□□□ -1.54
YNL040WP53960 YOR024WYOR024W 324 nt5.42□□□□□ -1.54
YNL040WP53960 SCO1YBR037C 888 nt5.42□□□□□ -1.54
YNL040WP53960 COX11YPL132W 903 nt5.42□□□□□ -1.54
YNL040WP53960 GAT4YIR013C 366 nt5.41□□□□□ -1.54
YNL040WP53960 POM33YLL023C 840 nt5.41□□□□□ -1.54
YNL040WP53960 RPA49YNL248C 1248 nt5.41□□□□□ -1.54
YNL040WP53960 ODC2YOR222W 924 nt5.41□□□□□ -1.54
YNL040WP53960 VMA13YPR036W 1437 nt5.4□□□□□ -1.54
YNL040WP53960 GET3YDL100C 1065 nt5.4□□□□□ -1.54
YNL040WP53960 SUA5YGL169W 1281 nt5.4□□□□□ -1.54
YNL040WP53960 YGL194C-AYGL194C-A 243 nt5.4□□□□□ -1.54
YNL040WP53960 SEC13YLR208W 894 nt5.4□□□□□ -1.54
YNL040WP53960 NOB1YOR056C 1380 nt5.4□□□□□ -1.55
YNL040WP53960 COQ6YGR255C 1440 nt5.4□□□□□ -1.55
YNL040WP53960 HST2YPL015C 1074 nt5.39□□□□□ -1.55
YNL040WP53960 SAM4YPL273W 978 nt5.39□□□□□ -1.55
YNL040WP53960 DCC1YCL016C 1143 nt5.39□□□□□ -1.55
YNL040WP53960 SOG2YOR353C 2376 nt5.39□□□□□ -1.55
YNL040WP53960 GAL10YBR019C 2100 nt5.39□□□□□ -1.55
YNL040WP53960 VBA1YMR088C 1689 nt5.38□□□□□ -1.55
YNL040WP53960 UTR4YEL038W 684 nt5.38□□□□□ -1.55
YNL040WP53960 MPM1YJL066C 759 nt5.38□□□□□ -1.55
YNL040WP53960 XPT1YJR133W 630 nt5.38□□□□□ -1.55
YNL040WP53960 ETR1YBR026C 1143 nt5.38□□□□□ -1.55
YNL040WP53960 RPL21BYPL079W 483 nt5.38□□□□□ -1.55
YNL040WP53960 DUR1,2YBR208C 5508 nt5.37□□□□□ -1.55
YNL040WP53960 RNR3YIL066C 2610 nt5.37□□□□□ -1.55
YNL040WP53960 HAP1YLR256W 4509 nt5.37□□□□□ -1.55
YNL040WP53960 PRP45YAL032C 1140 nt5.37□□□□□ -1.55
YNL040WP53960 YTH1YPR107C 627 nt5.37□□□□□ -1.55
YNL040WP53960 CUE2YKL090W 1332 nt5.37□□□□□ -1.55
YNL040WP53960 MCH4YOL119C 1506 nt5.37□□□□□ -1.55
YNL040WP53960 GRS1YBR121C 2004 nt5.36□□□□□ -1.55
YNL040WP53960 AVT3YKL146W 2079 nt5.36□□□□□ -1.55
YNL040WP53960 YGL036WYGL036W 2730 nt5.36□□□□□ -1.55
YNL040WP53960 MHR1YDR296W 681 nt5.36□□□□□ -1.55
YNL040WP53960 YFL064CYFL064C 525 nt5.36□□□□□ -1.55
YNL040WP53960 MRF1YGL143C 1242 nt5.36□□□□□ -1.55
YNL040WP53960 FHN1YGR131W 525 nt5.36□□□□□ -1.55
YNL040WP53960 ISU2YOR226C 471 nt5.36□□□□□ -1.55
YNL040WP53960 YPR202WYPR202W 717 nt5.36□□□□□ -1.55
YNL040WP53960 KDX1YKL161C 1302 nt5.36□□□□□ -1.55
YNL040WP53960 SIP5YMR140W 1470 nt5.36□□□□□ -1.55
YNL040WP53960 PDI1YCL043C 1569 nt5.36□□□□□ -1.55
YNL040WP53960 THI21YPL258C 1656 nt5.36□□□□□ -1.55
YNL040WP53960 YAP1YML007W 1953 nt5.36□□□□□ -1.55
YNL040WP53960 MSN2YMR037C 2115 nt5.36□□□□□ -1.55
YNL040WP53960 ECM3YOR092W 1842 nt5.35□□□□□ -1.55
YNL040WP53960 LDB18YLL049W 540 nt5.35□□□□□ -1.55
YNL040WP53960 IRS4YKR019C 1848 nt5.34□□□□□ -1.55
YNL040WP53960 FAT3YKL187C 2253 nt5.34□□□□□ -1.55
YNL040WP53960 DEF1YKL054C 2217 nt5.33□□□□□ -1.56
YNL040WP53960 OCA5YHL029C 2040 nt5.33□□□□□ -1.56
YNL040WP53960 UGA1YGR019W 1416 nt5.33□□□□□ -1.56
YNL040WP53960 ADE13YLR359W 1449 nt5.33□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms