Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Xcl1P47993 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Xcl1P47993 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Xcl1P47993 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Xcl1P47993 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.83□□□□□ -0.2
Xcl1P47993 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Xcl1P47993 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Xcl1P47993 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Xcl1P47993 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Xcl1P47993 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Xcl1P47993 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Xcl1P47993 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Xcl1P47993 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Xcl1P47993 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Xcl1P47993 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.82□□□□□ -0.2
Xcl1P47993 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Xcl1P47993 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Xcl1P47993 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Xcl1P47993 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC13.82□□□□□ -0.2
Xcl1P47993 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Xcl1P47993 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Xcl1P47993 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Xcl1P47993 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Xcl1P47993 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Xcl1P47993 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC13.81□□□□□ -0.2
Xcl1P47993 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Xcl1P47993 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.8□□□□□ -0.2
Xcl1P47993 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Xcl1P47993 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Xcl1P47993 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Xcl1P47993 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Xcl1P47993 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Xcl1P47993 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Xcl1P47993 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Xcl1P47993 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Xcl1P47993 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.79□□□□□ -0.2
Xcl1P47993 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Xcl1P47993 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Xcl1P47993 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Xcl1P47993 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Xcl1P47993 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Xcl1P47993 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Xcl1P47993 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Xcl1P47993 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Xcl1P47993 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.78□□□□□ -0.2
Xcl1P47993 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Xcl1P47993 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Xcl1P47993 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Xcl1P47993 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Xcl1P47993 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Xcl1P47993 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Xcl1P47993 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Xcl1P47993 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Xcl1P47993 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Xcl1P47993 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Xcl1P47993 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Xcl1P47993 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Xcl1P47993 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Xcl1P47993 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Xcl1P47993 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.76□□□□□ -0.21
Xcl1P47993 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Xcl1P47993 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Xcl1P47993 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Xcl1P47993 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Xcl1P47993 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Xcl1P47993 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Xcl1P47993 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Xcl1P47993 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Xcl1P47993 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Xcl1P47993 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Xcl1P47993 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms