Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 UTP7YER082C 1665 nt5.3□□□□□ -1.56
TDA11P38854 UGA1YGR019W 1416 nt5.3□□□□□ -1.56
TDA11P38854 NOC4YPR144C 1659 nt5.29□□□□□ -1.56
TDA11P38854 CIN4YMR138W 576 nt5.29□□□□□ -1.56
TDA11P38854 UBC11YOR339C 471 nt5.29□□□□□ -1.56
TDA11P38854 CSG2YBR036C 1233 nt5.29□□□□□ -1.56
TDA11P38854 YFL034WYFL034W 3222 nt5.29□□□□□ -1.56
TDA11P38854 HRP1YOL123W 1605 nt5.28□□□□□ -1.56
TDA11P38854 YFR052C-AYFR052C-A 306 nt5.28□□□□□ -1.56
TDA11P38854 ATG17YLR423C 1254 nt5.28□□□□□ -1.56
TDA11P38854 YNL108CYNL108C 813 nt5.28□□□□□ -1.56
TDA11P38854 AAD15YOL165C 432 nt5.28□□□□□ -1.56
TDA11P38854 CTS1YLR286C 1689 nt5.28□□□□□ -1.56
TDA11P38854 DRS1YLL008W 2259 nt5.27□□□□□ -1.57
TDA11P38854 YTA6YPL074W 2265 nt5.27□□□□□ -1.57
TDA11P38854 SUA5YGL169W 1281 nt5.27□□□□□ -1.57
TDA11P38854 BRL1YHR036W 1416 nt5.27□□□□□ -1.57
TDA11P38854 XPT1YJR133W 630 nt5.27□□□□□ -1.57
TDA11P38854 CTR3YLR411W 726 nt5.27□□□□□ -1.57
TDA11P38854 YOR024WYOR024W 324 nt5.27□□□□□ -1.57
TDA11P38854 NGL2YMR285C 1548 nt5.27□□□□□ -1.57
TDA11P38854 TEF1YPR080W 1377 nt5.27□□□□□ -1.57
TDA11P38854 TEF2YBR118W 1377 nt5.27□□□□□ -1.57
TDA11P38854 SOG2YOR353C 2376 nt5.27□□□□□ -1.57
TDA11P38854 DEF1YKL054C 2217 nt5.27□□□□□ -1.57
TDA11P38854 UBA2YDR390C 1911 nt5.27□□□□□ -1.57
TDA11P38854 MGS1YNL218W 1764 nt5.27□□□□□ -1.57
TDA11P38854 GLE1YDL207W 1617 nt5.26□□□□□ -1.57
TDA11P38854 RHB1YCR027C 630 nt5.26□□□□□ -1.57
TDA11P38854 AAD4YDL243C 990 nt5.26□□□□□ -1.57
TDA11P38854 YDR541CYDR541C 1035 nt5.26□□□□□ -1.57
TDA11P38854 RPR2YIR015W 435 nt5.26□□□□□ -1.57
TDA11P38854 ELA1YNL230C 1140 nt5.26□□□□□ -1.57
TDA11P38854 SNT2YGL131C 4212 nt5.26□□□□□ -1.57
TDA11P38854 CUE2YKL090W 1332 nt5.25□□□□□ -1.57
TDA11P38854 QDR1YIL120W 1692 nt5.25□□□□□ -1.57
TDA11P38854 RPS9AYPL081W 594 nt5.25□□□□□ -1.57
TDA11P38854 YBR144CYBR144C 315 nt5.25□□□□□ -1.57
TDA11P38854 VMS1YDR049W 1899 nt5.25□□□□□ -1.57
TDA11P38854 SRP101YDR292C 1866 nt5.25□□□□□ -1.57
TDA11P38854 COX17YLL009C 210 nt5.24□□□□□ -1.57
TDA11P38854 MRPL22YNL177C 930 nt5.24□□□□□ -1.57
TDA11P38854 NPL6YMR091C 1308 nt5.23□□□□□ -1.57
TDA11P38854 GUP2YPL189W 1830 nt5.23□□□□□ -1.57
TDA11P38854 TDA7YNL176C 1911 nt5.23□□□□□ -1.57
TDA11P38854 RIM15YFL033C 5313 nt5.23□□□□□ -1.57
TDA11P38854 AVO1YOL078W 3531 nt5.23□□□□□ -1.57
TDA11P38854 YFR035CYFR035C 345 nt5.23□□□□□ -1.57
TDA11P38854 MPM1YJL066C 759 nt5.23□□□□□ -1.57
TDA11P38854 LEM3YNL323W 1245 nt5.23□□□□□ -1.57
TDA11P38854 PRP46YPL151C 1356 nt5.23□□□□□ -1.57
TDA11P38854 ARO10YDR380W 1908 nt5.23□□□□□ -1.57
TDA11P38854 CAF4YKR036C 1932 nt5.23□□□□□ -1.57
TDA11P38854 PUS1YPL212C 1635 nt5.23□□□□□ -1.57
TDA11P38854 RAD53YPL153C 2466 nt5.22□□□□□ -1.57
TDA11P38854 IES1YFL013C 2079 nt5.22□□□□□ -1.57
TDA11P38854 ATG7YHR171W 1893 nt5.22□□□□□ -1.57
TDA11P38854 GTO1YGR154C 1071 nt5.22□□□□□ -1.57
TDA11P38854 RPA49YNL248C 1248 nt5.22□□□□□ -1.57
TDA11P38854 NRM1YNR009W 750 nt5.22□□□□□ -1.57
TDA11P38854 TRK2YKR050W 2670 nt5.22□□□□□ -1.57
TDA11P38854 YJL206CYJL206C 2277 nt5.22□□□□□ -1.57
TDA11P38854 UGO1YDR470C 1509 nt5.22□□□□□ -1.57
TDA11P38854 RSC30YHR056C 2652 nt5.21□□□□□ -1.57
TDA11P38854 TUP1YCR084C 2142 nt5.21□□□□□ -1.57
TDA11P38854 DDC1YPL194W 1839 nt5.21□□□□□ -1.58
TDA11P38854 JJJ3YJR097W 519 nt5.21□□□□□ -1.58
TDA11P38854 CKA2YOR061W 1020 nt5.21□□□□□ -1.58
TDA11P38854 ISU2YOR226C 471 nt5.21□□□□□ -1.58
TDA11P38854 SIT1YEL065W 1887 nt5.21□□□□□ -1.58
TDA11P38854 CLF1YLR117C 2064 nt5.2□□□□□ -1.58
TDA11P38854 UTP9YHR196W 1728 nt5.2□□□□□ -1.58
TDA11P38854 SRG1SRG1 551 nt5.2□□□□□ -1.58
TDA11P38854 AUA1YFL010W-A 285 nt5.2□□□□□ -1.58
TDA11P38854 RPL28YGL103W 450 nt5.2□□□□□ -1.58
TDA11P38854 YGR022CYGR022C 330 nt5.2□□□□□ -1.58
TDA11P38854 REV7YIL139C 738 nt5.2□□□□□ -1.58
TDA11P38854 YJL171CYJL171C 1191 nt5.2□□□□□ -1.58
TDA11P38854 MRP17YKL003C 396 nt5.2□□□□□ -1.58
TDA11P38854 YML131WYML131W 1098 nt5.2□□□□□ -1.58
TDA11P38854 SEC17YBL050W 879 nt5.2□□□□□ -1.58
TDA11P38854 IMA1YGR287C 1770 nt5.19□□□□□ -1.58
TDA11P38854 EIS1YMR031C 2532 nt5.19□□□□□ -1.58
TDA11P38854 NOP7YGR103W 1818 nt5.19□□□□□ -1.58
TDA11P38854 PHM8YER037W 966 nt5.19□□□□□ -1.58
TDA11P38854 EFM4YIL064W 774 nt5.19□□□□□ -1.58
TDA11P38854 DOM34YNL001W 1161 nt5.19□□□□□ -1.58
TDA11P38854 YMR155WYMR155W 1644 nt5.19□□□□□ -1.58
TDA11P38854 GLT1YDL171C 6438 nt5.19□□□□□ -1.58
TDA11P38854 ARB1YER036C 1833 nt5.18□□□□□ -1.58
TDA11P38854 YDL114WYDL114W 927 nt5.18□□□□□ -1.58
TDA11P38854 YEA6YEL006W 1008 nt5.18□□□□□ -1.58
TDA11P38854 GRX4YER174C 735 nt5.18□□□□□ -1.58
TDA11P38854 YJU2YKL095W 837 nt5.18□□□□□ -1.58
TDA11P38854 REC114YMR133W 1287 nt5.18□□□□□ -1.58
TDA11P38854 MSS116YDR194C 1995 nt5.18□□□□□ -1.58
TDA11P38854 NTH2YBR001C 2343 nt5.18□□□□□ -1.58
TDA11P38854 DED81YHR019C 1665 nt5.18□□□□□ -1.58
TDA11P38854 RCK1YGL158W 1539 nt5.18□□□□□ -1.58
TDA11P38854 AXL2YIL140W 2472 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms