Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 POU5F1P6-201ENST00000466990 990 ntBASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AL023803.2-201ENST00000620080 638 ntBASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AL138799.1-201ENST00000448213 1675 ntBASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZC3H4Q9UPT8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 GGT3P-204ENST00000453783 1664 ntBASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 AC073352.2-201ENST00000609385 439 ntBASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 MIR6756-201ENST00000616240 63 ntBASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 AL592424.1-201ENST00000563624 1536 ntBASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 AP001282.1-201ENST00000531301 1499 ntBASIC18.86■□□□□ 0.61
ZC3H4Q9UPT8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC011270.2-201ENST00000624293 2550 ntBASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AL162727.3-201ENST00000635661 2787 ntBASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC006335.1-201ENST00000445200 547 ntBASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC114812.1-204ENST00000449669 728 ntBASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC019193.1-201ENST00000506678 823 ntBASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZC3H4Q9UPT8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms