Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 INE1-201ENST00000456273 945 ntBASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 RN7SL837P-201ENST00000463010 287 ntBASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 AC132938.2-201ENST00000579188 680 ntBASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 AL591163.1-201ENST00000641757 987 ntBASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM35Q9UPQ4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 AC087481.3-201ENST00000602886 1894 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 KRT8P22-201ENST00000562317 1415 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 AP006294.1-201ENST00000415407 339 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 AC134915.1-201ENST00000426461 574 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 GAPDHP21-201ENST00000450301 1010 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 AP003400.6-201ENST00000624698 740 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 AL033527.5-201ENST00000641382 801 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 C18orf15-201ENST00000623680 2534 ntBASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM35Q9UPQ4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AC013268.4-201ENST00000637413 2228 ntBASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AC012497.1-201ENST00000429392 575 ntBASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 CLUHP6-201ENST00000580789 941 ntBASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 HCG11-201ENST00000411553 5696 ntBASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 TMBIM7P-203ENST00000641617 1718 ntBASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM35Q9UPQ4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms