Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNRF3Q9ULT6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ZNRF3Q9ULT6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 MIR33B-201ENST00000385104 96 ntBASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 AL645937.2-201ENST00000396808 931 ntBASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 LDHBP1-201ENST00000455730 1119 ntBASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 AC005730.2-201ENST00000564549 1184 ntBASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 RN7SL774P-201ENST00000577467 290 ntBASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 ZACNP1-201ENST00000612259 710 ntBASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNRF3Q9ULT6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNRF3Q9ULT6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
ZNRF3Q9ULT6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 Z97180.1-201ENST00000445173 988 ntBASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 MIR5572-201ENST00000583188 137 ntBASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 OR10B1P-201ENST00000601666 907 ntBASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 AC073413.1-201ENST00000603927 732 ntBASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms