Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 AL589702.1-201ENST00000641229 1509 ntBASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LIN7CQ9NUP9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AC090616.6-203ENST00000579186 1945 ntBASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AC211486.1-202ENST00000416371 468 ntBASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AC211476.1-201ENST00000503899 468 ntBASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 MIR4469-201ENST00000583919 79 ntBASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AC026120.1-201ENST00000611536 926 ntBASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.17□□□□□ -0.3
LIN7CQ9NUP9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AC134407.2-201ENST00000625089 1978 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TFAMP1-201ENST00000412727 736 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 ADH5P3-201ENST00000433842 1137 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SPDYE11-202ENST00000450699 704 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms