Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 PAN3-AS1-201ENST00000563843 1351 ntBASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.64□□□□□ -0.71
SND1-IT1Q9HBX3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 AC012569.1-201ENST00000591191 1524 ntBASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 AC011477.6-201ENST00000604980 1927 ntBASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 SART3-203ENST00000546611 1184 ntBASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 AL355877.3-201ENST00000622820 899 ntBASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 AC112693.3-201ENST00000624819 1983 ntBASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 AC092127.1-201ENST00000567093 3455 ntBASIC10.63□□□□□ -0.71
SND1-IT1Q9HBX3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms