Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 AC079328.2-201ENST00000561241 3354 ntBASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 AC006001.1-201ENST00000325130 474 ntBASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 BCYRN1-201ENST00000418539 200 ntBASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 AC006033.1-201ENST00000440505 426 ntBASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 MIR663B-201ENST00000408361 115 ntBASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 AP006547.1-201ENST00000563435 692 ntBASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP2Q96SN8 AL157414.3-201ENST00000624276 1954 ntBASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AC004945.1-201ENST00000416738 983 ntBASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AC005730.2-201ENST00000564549 1184 ntBASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 AC008687.7-202ENST00000637404 953 ntBASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP2Q96SN8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP2Q96SN8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms