Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 ACTG1P14-201ENST00000446382 1122 ntBASIC14.11□□□□□ -0.15
LRRC28Q86X40 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 AP002472.1-201ENST00000577490 586 ntBASIC14.11□□□□□ -0.15
LRRC28Q86X40 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 C18orf15-201ENST00000623680 2534 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 AGAP7P-201ENST00000582299 2062 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 AGAP14-201ENST00000624701 2060 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 HMGA1P7-201ENST00000406908 502 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 AC211486.1-202ENST00000416371 468 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 AC140658.5-201ENST00000438532 169 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 AC211476.1-201ENST00000503899 468 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 AL691403.2-201ENST00000618460 490 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 AP001350.2-201ENST00000625104 1094 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 AC079781.4-201ENST00000641908 219 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 AC097376.2-205ENST00000610159 5334 ntBASIC14.1□□□□□ -0.15
LRRC28Q86X40 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRC28Q86X40 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRRC28Q86X40 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 ELL2P1-201ENST00000413990 1906 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC011477.6-201ENST00000604980 1927 ntBASIC14.09□□□□□ -0.15
LRRC28Q86X40 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRRC28Q86X40 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.09□□□□□ -0.15
LRRC28Q86X40 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms