Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 AC079328.1-201ENST00000560358 952 ntBASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD4Q5XG99 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 HIST2H2BC-201ENST00000498492 580 ntBASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 AC011477.6-201ENST00000604980 1927 ntBASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LYSMD4Q5XG99 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 MIR663B-201ENST00000408361 115 ntBASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 POM121L10P-201ENST00000436994 1285 ntBASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 CNN2P10-201ENST00000443067 918 ntBASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 UPF3AP2-201ENST00000457924 1132 ntBASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 AC015967.2-201ENST00000624092 234 ntBASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 AC006435.4-201ENST00000625037 234 ntBASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 AL356737.1-201ENST00000634391 234 ntBASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD4Q5XG99 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD4Q5XG99 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD4Q5XG99 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
LYSMD4Q5XG99 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD4Q5XG99 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD4Q5XG99 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD4Q5XG99 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms