Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC27Q2M243 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CCDC27Q2M243 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC27Q2M243 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC27Q2M243 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC27Q2M243 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC27Q2M243 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CCDC27Q2M243 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC27Q2M243 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC27Q2M243 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CCDC27Q2M243 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC27Q2M243 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC27Q2M243 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 API5-211ENST00000534695 560 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 AC036164.1-201ENST00000570544 333 ntBASIC20.39■□□□□ 0.85
CCDC27Q2M243 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC27Q2M243 AC073347.1-201ENST00000421633 2643 ntBASIC20.39■□□□□ 0.85
CCDC27Q2M243 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC27Q2M243 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 FAM86LP-201ENST00000478302 853 ntBASIC20.38■□□□□ 0.85
CCDC27Q2M243 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 BRI3BPP1-201ENST00000594224 787 ntBASIC20.38■□□□□ 0.85
CCDC27Q2M243 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC27Q2M243 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC27Q2M243 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC27Q2M243 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC27Q2M243 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC27Q2M243 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC27Q2M243 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC27Q2M243 AC006486.2-201ENST00000624246 2199 ntBASIC20.37■□□□□ 0.85
CCDC27Q2M243 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 GHSR-202ENST00000427970 912 ntBASIC20.37■□□□□ 0.85
CCDC27Q2M243 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 AL353779.1-201ENST00000434793 351 ntBASIC20.37■□□□□ 0.85
CCDC27Q2M243 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC27Q2M243 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC27Q2M243 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms