Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 AC104640.1-201ENST00000562617 2109 ntBASIC18.89■□□□□ 0.61
RFX7Q2KHR2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 AL645728.2-202ENST00000641679 227 ntBASIC18.89■□□□□ 0.61
RFX7Q2KHR2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 AC136621.1-201ENST00000624017 2304 ntBASIC18.89■□□□□ 0.61
RFX7Q2KHR2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RFX7Q2KHR2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 AC092384.3-202ENST00000564646 2873 ntBASIC18.88■□□□□ 0.61
RFX7Q2KHR2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 CROCCP4-201ENST00000457096 498 ntBASIC18.88■□□□□ 0.61
RFX7Q2KHR2 FAM86LP-201ENST00000478302 853 ntBASIC18.88■□□□□ 0.61
RFX7Q2KHR2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFX7Q2KHR2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AL162726.2-201ENST00000438986 1017 ntBASIC18.87■□□□□ 0.61
RFX7Q2KHR2 RPS2P32-201ENST00000439199 892 ntBASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AC104596.2-201ENST00000512793 793 ntBASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.87■□□□□ 0.61
RFX7Q2KHR2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.87■□□□□ 0.61
RFX7Q2KHR2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFX7Q2KHR2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 INTS4P2-202ENST00000614726 2019 ntBASIC18.86■□□□□ 0.61
RFX7Q2KHR2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 AC126177.1-201ENST00000547829 2218 ntBASIC18.86■□□□□ 0.61
RFX7Q2KHR2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 AC126365.1-201ENST00000578585 1514 ntBASIC18.86■□□□□ 0.61
RFX7Q2KHR2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms