Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SKP1P63208 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15□□□□□ -0.01
SKP1P63208 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SKP1P63208 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15□□□□□ -0.01
SKP1P63208 USP40-206ENST00000443711 628 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15□□□□□ -0.01
SKP1P63208 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SKP1P63208 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15□□□□□ -0.01
SKP1P63208 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 AC092364.2-202ENST00000597012 1073 ntBASIC15□□□□□ -0.01
SKP1P63208 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15□□□□□ -0.01
SKP1P63208 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15□□□□□ -0.01
SKP1P63208 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15□□□□□ -0.01
SKP1P63208 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SKP1P63208 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15□□□□□ -0.01
SKP1P63208 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SKP1P63208 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SKP1P63208 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.99□□□□□ -0.01
SKP1P63208 AL162727.3-201ENST00000635661 2787 ntBASIC14.99□□□□□ -0.01
SKP1P63208 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SKP1P63208 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.99□□□□□ -0.01
SKP1P63208 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
SKP1P63208 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SKP1P63208 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SKP1P63208 TARDBPP1-201ENST00000442013 1203 ntBASIC14.99□□□□□ -0.01
SKP1P63208 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.99□□□□□ -0.01
SKP1P63208 TSPY16P-201ENST00000449843 468 ntBASIC14.99□□□□□ -0.01
SKP1P63208 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.99□□□□□ -0.01
SKP1P63208 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.99□□□□□ -0.01
SKP1P63208 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.99□□□□□ -0.01
SKP1P63208 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.99□□□□□ -0.01
SKP1P63208 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.99□□□□□ -0.01
SKP1P63208 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SKP1P63208 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.98□□□□□ -0.01
SKP1P63208 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.98□□□□□ -0.01
SKP1P63208 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.98□□□□□ -0.01
SKP1P63208 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.98□□□□□ -0.01
SKP1P63208 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 AC022188.1-201ENST00000620960 1664 ntBASIC14.98□□□□□ -0.01
SKP1P63208 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SKP1P63208 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.98□□□□□ -0.01
SKP1P63208 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.98□□□□□ -0.01
SKP1P63208 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.98□□□□□ -0.01
SKP1P63208 AC015922.1-201ENST00000421102 1152 ntBASIC14.98□□□□□ -0.01
SKP1P63208 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.98□□□□□ -0.01
SKP1P63208 HMGN1P19-201ENST00000436976 333 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms