Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 AC105917.1-201ENST00000506637 2539 ntBASIC16.78■□□□□ 0.28
CDH8P55286 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH8P55286 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 API5-211ENST00000534695 560 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH8P55286 AC190387.1-201ENST00000551683 408 ntBASIC16.78■□□□□ 0.28
CDH8P55286 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDH8P55286 AL391069.4-201ENST00000609583 481 ntBASIC16.78■□□□□ 0.28
CDH8P55286 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH8P55286 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH8P55286 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH8P55286 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDH8P55286 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH8P55286 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH8P55286 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH8P55286 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CDH8P55286 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH8P55286 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CDH8P55286 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CDH8P55286 PIN1P1-201ENST00000412108 996 ntBASIC16.77■□□□□ 0.28
CDH8P55286 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH8P55286 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH8P55286 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.77■□□□□ 0.28
CDH8P55286 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.77■□□□□ 0.28
CDH8P55286 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH8P55286 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH8P55286 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 MIR8072-201ENST00000614241 80 ntBASIC16.77■□□□□ 0.28
CDH8P55286 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH8P55286 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH8P55286 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.77■□□□□ 0.27
CDH8P55286 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH8P55286 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH8P55286 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
CDH8P55286 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.77■□□□□ 0.27
CDH8P55286 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH8P55286 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH8P55286 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH8P55286 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.77■□□□□ 0.27
CDH8P55286 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH8P55286 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH8P55286 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH8P55286 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDH8P55286 SLC7A15P-201ENST00000424028 1363 ntBASIC16.77■□□□□ 0.27
CDH8P55286 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH8P55286 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH8P55286 AC090616.6-203ENST00000579186 1945 ntBASIC16.76■□□□□ 0.27
CDH8P55286 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH8P55286 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH8P55286 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
CDH8P55286 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH8P55286 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH8P55286 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH8P55286 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CDH8P55286 AC138969.3-201ENST00000546612 1459 ntBASIC16.76■□□□□ 0.27
CDH8P55286 AC138932.2-201ENST00000548268 1459 ntBASIC16.76■□□□□ 0.27
CDH8P55286 AC126755.4-201ENST00000549796 1459 ntBASIC16.76■□□□□ 0.27
CDH8P55286 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH8P55286 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms