Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CENPFP49454 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.4■□□□□ 0.38
CENPFP49454 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.4■□□□□ 0.38
CENPFP49454 AC006335.1-201ENST00000445200 547 ntBASIC17.4■□□□□ 0.38
CENPFP49454 AL133466.1-201ENST00000447582 150 ntBASIC17.4■□□□□ 0.38
CENPFP49454 AL391280.1-201ENST00000506969 1062 ntBASIC17.4■□□□□ 0.38
CENPFP49454 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CENPFP49454 AC007881.3-201ENST00000608897 607 ntBASIC17.4■□□□□ 0.38
CENPFP49454 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 AC136759.1-202ENST00000530858 2194 ntBASIC17.4■□□□□ 0.38
CENPFP49454 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CENPFP49454 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CENPFP49454 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.4■□□□□ 0.38
CENPFP49454 AC097359.3-201ENST00000603982 1210 ntBASIC17.4■□□□□ 0.38
CENPFP49454 AC244157.2-201ENST00000616239 1006 ntBASIC17.4■□□□□ 0.38
CENPFP49454 AC009084.3-201ENST00000623356 437 ntBASIC17.4■□□□□ 0.38
CENPFP49454 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.4■□□□□ 0.38
CENPFP49454 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.4■□□□□ 0.38
CENPFP49454 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CENPFP49454 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.4■□□□□ 0.38
CENPFP49454 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CENPFP49454 EIF5AP2-201ENST00000585668 1047 ntBASIC17.4■□□□□ 0.38
CENPFP49454 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.4■□□□□ 0.38
CENPFP49454 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
CENPFP49454 AL805961.1-203ENST00000641078 1258 ntBASIC17.4■□□□□ 0.38
CENPFP49454 CAP2P1-201ENST00000557743 1390 ntBASIC17.4■□□□□ 0.38
CENPFP49454 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CENPFP49454 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CENPFP49454 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.39■□□□□ 0.38
CENPFP49454 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPFP49454 AC004923.1-202ENST00000642106 209 ntBASIC17.39■□□□□ 0.37
CENPFP49454 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CENPFP49454 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CENPFP49454 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPFP49454 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.39■□□□□ 0.37
CENPFP49454 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.39■□□□□ 0.37
CENPFP49454 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.39■□□□□ 0.37
CENPFP49454 AC010491.1-201ENST00000563101 2797 ntBASIC17.39■□□□□ 0.37
CENPFP49454 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CENPFP49454 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CENPFP49454 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CENPFP49454 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CENPFP49454 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPFP49454 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.38■□□□□ 0.37
CENPFP49454 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.38■□□□□ 0.37
CENPFP49454 GHSR-202ENST00000427970 912 ntBASIC17.38■□□□□ 0.37
CENPFP49454 AL139008.1-201ENST00000437894 228 ntBASIC17.38■□□□□ 0.37
CENPFP49454 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPFP49454 AC026410.1-201ENST00000507366 1101 ntBASIC17.38■□□□□ 0.37
CENPFP49454 MARK2P5-201ENST00000507649 634 ntBASIC17.38■□□□□ 0.37
CENPFP49454 IGHV3-37-201ENST00000518544 340 ntBASIC17.38■□□□□ 0.37
CENPFP49454 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.38■□□□□ 0.37
CENPFP49454 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.38■□□□□ 0.37
CENPFP49454 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.38■□□□□ 0.37
CENPFP49454 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CENPFP49454 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CENPFP49454 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CENPFP49454 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CENPFP49454 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CENPFP49454 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CENPFP49454 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms