Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.29□□□□□ -0.12
GDF1P27539 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 COX5BP8-201ENST00000416911 349 ntBASIC14.29□□□□□ -0.12
GDF1P27539 NME2P1-201ENST00000426182 414 ntBASIC14.29□□□□□ -0.12
GDF1P27539 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 RN7SL399P-201ENST00000471648 279 ntBASIC14.29□□□□□ -0.12
GDF1P27539 AC011495.1-201ENST00000498085 584 ntBASIC14.29□□□□□ -0.12
GDF1P27539 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.29□□□□□ -0.12
GDF1P27539 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.29□□□□□ -0.12
GDF1P27539 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.29□□□□□ -0.12
GDF1P27539 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
GDF1P27539 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GDF1P27539 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.29□□□□□ -0.12
GDF1P27539 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GDF1P27539 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 TOMM22P5-201ENST00000416399 439 ntBASIC14.28□□□□□ -0.12
GDF1P27539 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.28□□□□□ -0.12
GDF1P27539 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.28□□□□□ -0.12
GDF1P27539 ELK1P1-201ENST00000485699 580 ntBASIC14.28□□□□□ -0.12
GDF1P27539 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 CR383656.12-201ENST00000549567 513 ntBASIC14.28□□□□□ -0.12
GDF1P27539 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
GDF1P27539 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
GDF1P27539 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
GDF1P27539 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
GDF1P27539 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GDF1P27539 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GDF1P27539 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GDF1P27539 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GDF1P27539 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.28□□□□□ -0.12
GDF1P27539 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.27□□□□□ -0.12
GDF1P27539 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
GDF1P27539 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
GDF1P27539 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
GDF1P27539 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
GDF1P27539 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.27□□□□□ -0.12
GDF1P27539 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.27□□□□□ -0.12
GDF1P27539 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.27□□□□□ -0.12
GDF1P27539 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.27□□□□□ -0.12
GDF1P27539 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.27□□□□□ -0.12
GDF1P27539 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GDF1P27539 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms