Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.78■□□□□ 0.12
XRCC1P18887 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.78■□□□□ 0.12
XRCC1P18887 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.78■□□□□ 0.12
XRCC1P18887 TEX28P1-201ENST00000613479 1221 ntBASIC15.78■□□□□ 0.12
XRCC1P18887 TEX28P2-201ENST00000617764 1221 ntBASIC15.78■□□□□ 0.12
XRCC1P18887 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.78■□□□□ 0.12
XRCC1P18887 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.78■□□□□ 0.12
XRCC1P18887 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
XRCC1P18887 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
XRCC1P18887 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.78■□□□□ 0.12
XRCC1P18887 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
XRCC1P18887 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
XRCC1P18887 AL592424.1-201ENST00000563624 1536 ntBASIC15.78■□□□□ 0.12
XRCC1P18887 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC1P18887 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
XRCC1P18887 AP003680.1-201ENST00000598970 3660 ntBASIC15.78■□□□□ 0.12
XRCC1P18887 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.78■□□□□ 0.12
XRCC1P18887 AC006486.2-201ENST00000624246 2199 ntBASIC15.77■□□□□ 0.12
XRCC1P18887 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
XRCC1P18887 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.77■□□□□ 0.12
XRCC1P18887 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC1P18887 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.77■□□□□ 0.12
XRCC1P18887 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.77■□□□□ 0.12
XRCC1P18887 AC087499.5-201ENST00000452760 1342 ntBASIC15.77■□□□□ 0.12
XRCC1P18887 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC1P18887 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.77■□□□□ 0.12
XRCC1P18887 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC1P18887 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.77■□□□□ 0.12
XRCC1P18887 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.77■□□□□ 0.12
XRCC1P18887 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC1P18887 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC1P18887 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.77■□□□□ 0.12
XRCC1P18887 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.77■□□□□ 0.12
XRCC1P18887 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.77■□□□□ 0.12
XRCC1P18887 TSPY16P-201ENST00000449843 468 ntBASIC15.77■□□□□ 0.12
XRCC1P18887 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.77■□□□□ 0.12
XRCC1P18887 AL139010.1-201ENST00000454878 894 ntBASIC15.77■□□□□ 0.12
XRCC1P18887 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.77■□□□□ 0.12
XRCC1P18887 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC1P18887 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.77■□□□□ 0.12
XRCC1P18887 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.77■□□□□ 0.12
XRCC1P18887 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.77■□□□□ 0.12
XRCC1P18887 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.77■□□□□ 0.12
XRCC1P18887 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC1P18887 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
XRCC1P18887 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC1P18887 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
XRCC1P18887 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC1P18887 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.77■□□□□ 0.11
XRCC1P18887 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
XRCC1P18887 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC1P18887 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC1P18887 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
XRCC1P18887 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.76■□□□□ 0.11
XRCC1P18887 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
XRCC1P18887 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 SPDYE17-201ENST00000412399 783 ntBASIC15.76■□□□□ 0.11
XRCC1P18887 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.76■□□□□ 0.11
XRCC1P18887 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.76■□□□□ 0.11
XRCC1P18887 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 UGT1A2P-201ENST00000454886 866 ntBASIC15.76■□□□□ 0.11
XRCC1P18887 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
XRCC1P18887 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.76■□□□□ 0.11
XRCC1P18887 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
XRCC1P18887 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.76■□□□□ 0.11
XRCC1P18887 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.76■□□□□ 0.11
XRCC1P18887 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms