Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.59□□□□□ -0.07
IDH3BO43837 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.59□□□□□ -0.07
IDH3BO43837 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
IDH3BO43837 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.59□□□□□ -0.07
IDH3BO43837 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.59□□□□□ -0.07
IDH3BO43837 MIR7706-201ENST00000613747 67 ntBASIC14.59□□□□□ -0.07
IDH3BO43837 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IDH3BO43837 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IDH3BO43837 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 AC138969.2-201ENST00000532739 9932 ntBASIC14.59□□□□□ -0.07
IDH3BO43837 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IDH3BO43837 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
IDH3BO43837 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
IDH3BO43837 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
IDH3BO43837 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.58□□□□□ -0.07
IDH3BO43837 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
IDH3BO43837 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IDH3BO43837 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
IDH3BO43837 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3BO43837 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
IDH3BO43837 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
IDH3BO43837 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3BO43837 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.58□□□□□ -0.08
IDH3BO43837 RNA5SP415-201ENST00000517246 115 ntBASIC14.58□□□□□ -0.08
IDH3BO43837 IGHV3-22-201ENST00000520721 359 ntBASIC14.58□□□□□ -0.08
IDH3BO43837 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
IDH3BO43837 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.58□□□□□ -0.08
IDH3BO43837 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
IDH3BO43837 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 AC104692.2-201ENST00000603054 253 ntBASIC14.58□□□□□ -0.08
IDH3BO43837 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 AL031008.1-201ENST00000619963 541 ntBASIC14.58□□□□□ -0.08
IDH3BO43837 AC010507.1-201ENST00000633895 436 ntBASIC14.58□□□□□ -0.08
IDH3BO43837 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3BO43837 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.58□□□□□ -0.08
IDH3BO43837 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
IDH3BO43837 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
IDH3BO43837 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
IDH3BO43837 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3BO43837 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IDH3BO43837 AP001282.1-201ENST00000531301 1499 ntBASIC14.57□□□□□ -0.08
IDH3BO43837 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3BO43837 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3BO43837 AL589702.1-201ENST00000641229 1509 ntBASIC14.57□□□□□ -0.08
IDH3BO43837 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3BO43837 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
IDH3BO43837 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3BO43837 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.57□□□□□ -0.08
IDH3BO43837 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3BO43837 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3BO43837 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3BO43837 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms