Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
MSH5O43196 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MSH5O43196 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
MSH5O43196 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
MSH5O43196 MIR661-201ENST00000384842 89 ntBASIC22.14■■□□□ 1.13
MSH5O43196 RNU2-72P-201ENST00000411175 163 ntBASIC22.14■■□□□ 1.13
MSH5O43196 AL671277.1-201ENST00000429656 993 ntBASIC22.14■■□□□ 1.13
MSH5O43196 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC22.14■■□□□ 1.13
MSH5O43196 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
MSH5O43196 SPDYE11-202ENST00000450699 704 ntBASIC22.14■■□□□ 1.13
MSH5O43196 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC22.14■■□□□ 1.13
MSH5O43196 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 TRAV11-201ENST00000539512 339 ntBASIC22.14■■□□□ 1.13
MSH5O43196 SPDYE9P-201ENST00000570642 692 ntBASIC22.14■■□□□ 1.13
MSH5O43196 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC22.14■■□□□ 1.13
MSH5O43196 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC22.14■■□□□ 1.13
MSH5O43196 AC007346.1-202ENST00000602826 684 ntBASIC22.14■■□□□ 1.13
MSH5O43196 NTAN1P1-201ENST00000603150 646 ntBASIC22.14■■□□□ 1.13
MSH5O43196 AL118558.3-201ENST00000607414 1079 ntBASIC22.14■■□□□ 1.13
MSH5O43196 SPDYE10P-202ENST00000612005 668 ntBASIC22.14■■□□□ 1.13
MSH5O43196 SPDYE8P-202ENST00000612377 668 ntBASIC22.14■■□□□ 1.13
MSH5O43196 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.14■■□□□ 1.13
MSH5O43196 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
MSH5O43196 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC22.14■■□□□ 1.13
MSH5O43196 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.14■■□□□ 1.13
MSH5O43196 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC22.14■■□□□ 1.13
MSH5O43196 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 TUBB3P1-201ENST00000405796 1332 ntBASIC22.13■■□□□ 1.13
MSH5O43196 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.13■■□□□ 1.13
MSH5O43196 MTND4P9-201ENST00000507819 1346 ntBASIC22.13■■□□□ 1.13
MSH5O43196 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.13■■□□□ 1.13
MSH5O43196 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
MSH5O43196 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC22.13■■□□□ 1.13
MSH5O43196 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.13■■□□□ 1.13
MSH5O43196 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 AP001619.2-201ENST00000458654 587 ntTSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 SCARNA7-201ENST00000458797 330 ntBASIC22.13■■□□□ 1.13
MSH5O43196 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 THAP6-210ENST00000507557 542 ntTSL 4 BASIC22.13■■□□□ 1.13
MSH5O43196 AC027338.1-201ENST00000514840 825 ntBASIC22.13■■□□□ 1.13
MSH5O43196 KRT8P48-201ENST00000515599 1220 ntBASIC22.13■■□□□ 1.13
MSH5O43196 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC22.13■■□□□ 1.13
MSH5O43196 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.13■■□□□ 1.13
MSH5O43196 AC007610.3-201ENST00000566879 934 ntBASIC22.13■■□□□ 1.13
MSH5O43196 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC22.13■■□□□ 1.13
MSH5O43196 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 RN7SL488P-201ENST00000585186 286 ntBASIC22.13■■□□□ 1.13
MSH5O43196 AP001357.1-201ENST00000586304 1053 ntBASIC22.13■■□□□ 1.13
MSH5O43196 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC22.13■■□□□ 1.13
MSH5O43196 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 AL118508.4-201ENST00000624142 1176 ntBASIC22.13■■□□□ 1.13
MSH5O43196 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC22.13■■□□□ 1.13
MSH5O43196 AC099654.8-201ENST00000637757 681 ntBASIC22.13■■□□□ 1.13
MSH5O43196 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC22.13■■□□□ 1.13
MSH5O43196 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
MSH5O43196 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC22.13■■□□□ 1.13
MSH5O43196 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
MSH5O43196 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC22.13■■□□□ 1.13
MSH5O43196 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC22.12■■□□□ 1.13
MSH5O43196 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
MSH5O43196 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
MSH5O43196 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC22.12■■□□□ 1.13
MSH5O43196 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 CRABP2-203ENST00000368222 992 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MSH5O43196 PADI4-202ENST00000375453 841 ntTSL 2 BASIC22.12■■□□□ 1.13
MSH5O43196 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms